Dr Jurgen Fripp
Adjunct
School of Information Technology and Electrical Engineering
Journal Articles
Marsh, Georgia, Aung, Ohnmar, Ceslis, Amelia, Adam, Robert, Mosley, Philip, Fripp, Jurgen and Robinson, Gail A. (2024). Generation of novel ideas: creativity in Alzheimer’s disease, mild cognitive impairment, and healthy older adults. Creativity Research Journal, 1-16. doi: 10.1080/10400419.2024.2304498
Beaumont, Jeremy, Fripp, Jurgen, Raniga, Parnesh, Acosta, Oscar, Ferre, Jean-Christophe, McMahon, Katie, Trinder, Julie, Kober, Tobias and Gambarota, Giulio (2023). Multi T1-weighted contrast imaging and T1 mapping with compressed sensing FLAWS at 3 T. Magnetic Resonance Materials in Physics, Biology and Medicine, 36 (5), 823-836. doi: 10.1007/s10334-023-01071-5
Fazlollahi, Amir, Xia, Ying, Lupton, Michelle K., Raniga, Parnesh, Bourgeat, Pierrick, Martin, Nick, Dore, Vincent, Rose, Stephen, Salvado, Olivier, Breakspear, Michael and Fripp, Jurgen (2022). Early effects of amyloid-β on structural and vascular brain changes in mid-life cognitively unimpaired individuals. Alzheimer's and dementia : the journal of the Alzheimer's Association, 17, 1-3. doi: 10.1002/alz.052681
Li, Mao, Venäläinen, Mikko S., Chandra, Shekhar S., Patel, Rushabh, Fripp, Jurgen, Engstrom, Craig, Korhonen, Rami K., Töyräs, Juha and Crozier, Stuart (2021). Discrete element and finite element methods provide similar estimations for hip joint contact mechanics during walking gait. Journal of Biomechanics, 115 110163, 1-11. doi: 10.1016/j.jbiomech.2020.110163
Wang, Zhiqiang, Jones, Graeme, Winzenberg, Tania, Cai, Guoqi, Laslett, Laura L., Aitken, Dawn, Hopper, Ingrid, Singh, Ambrish, Jones, Robert, Fripp, Jurgen, Ding, Changhai and Antony, Benny (2020). Effectiveness of Curcuma longa Extract for the Treatment of Symptoms and Effusion-Synovitis of Knee Osteoarthritis : A Randomized Trial. Annals of Internal Medicine, 173 (11), 861-869. doi: 10.7326/M20-0990
Wallace, Erica J., Mathias, Jane L., Ward, Lynn, Pannek, Kerstin, Fripp, Jurgen and Rose, Stephen (2020). Chronic white matter changes detected using diffusion tensor imaging following adult traumatic brain injury and their relationship to cognition. Neuropsychology, 34 (8), 881-893. doi: 10.1037/neu0000690
Pannek, Kerstin, George, Joanne M., Boyd, Roslyn N., Colditz, Paul B., Rose, Stephen E. and Fripp, Jurgen (2020). Brain microstructure and morphology of very preterm-born infants at term equivalent age: associations with motor and cognitive outcomes at 1 and 2 years. NeuroImage, 221 117163, 117163. doi: 10.1016/j.neuroimage.2020.117163
Neubert, Aleš, Bourgeat, Pierrick, Wood, Jason, Engstrom, Craig, Chandra, Shekhar S., Crozier, Stuart and Fripp, Jurgen (2020). Simultaneous super-resolution and contrast synthesis of routine clinical magnetic resonance images of the knee for improving automatic segmentation of joint cartilage: data from the Osteoarthritis Initiative. Medical Physics, 47 (10) mp.14421, 4939-4948. doi: 10.1002/mp.14421
Wallace, Erica J., Mathias, Jane L., Ward, Lynn, Fripp, Jurgen, Rose, Stephen and Pannek, Kerstin (2020). A fixel-based analysis of micro- and macro-structural changes to white matter following adult traumatic brain injury. Human Brain Mapping, 41 (8), 2187-2197. doi: 10.1002/hbm.24939
Pagnozzi, Alex M., Pannek, Kerstin, Fripp, Jurgen, Fiori, Simona, Boyd, Roslyn N. and Rose, Stephen (2020). Understanding the impact of bilateral brain injury in children with unilateral cerebral palsy. Human Brain Mapping, 41 (10) hbm.24978, 2794-2807. doi: 10.1002/hbm.24978
Chandra, Shekhar S., Engstrom, Craig, Fripp, Jurgen, Neubert, Ales, Jin, Jin, Walker, Duncan, Salvado, Olivier, Ho, Charles and Crozier, Stuart (2018). Local contrast-enhanced MR images via high dynamic range processing. Magnetic Resonance in Medicine, 80 (3), 1206-1218. doi: 10.1002/mrm.27109
Chandra, Shekhar S., Dowling, Jason A., Engstrom, Craig, Xia, Ying, Paproki, Anthony, Neubert, Aleš, Rivest-Hénault, David, Salvado, Olivier, Crozier, Stuart and Fripp, Jurgen (2018). A lightweight rapid application development framework for biomedical image analysis. Computer Methods and Programs in Biomedicine, 164, 193-205. doi: 10.1016/j.cmpb.2018.07.011
George, Joanne M., Fiori, Simona, Fripp, Jurgen, Pannek, Kerstin, Guzzetta, Andrea, David, Michael, Ware, Robert S, Rose, Stephen E, Colditz, Paul B and Boyd, Roslyn N (2018). Relationship between very early brain structure and neuromotor, neurological and neurobehavioral function in infants born <31 weeks gestational age. Early Human Development, 117, 74-82. doi: 10.1016/j.earlhumdev.2017.12.014
Pannek, Kerstin, Fripp, Jurgen, George, Joanne M., Fiori, Simona, Colditz, Paul B., Boyd, Roslyn N. and Rose, Stephen E. (2018). Fixel-based analysis reveals alterations is brain microstructure and macrostructure of preterm-born infants at term equivalent age. NeuroImage: Clinical, 18, 51-59. doi: 10.1016/j.nicl.2018.01.003
Pedrini, Steve, Gupta, Veer B., Hone, Eugene, Doecke, James, O'Bryant, Sid, James, Ian, Bush, Ashley I., Rowe, Christopher C., Villemagne, Victor L., Ames, David, Masters, Colin L., Martins, Ralph N., Savage, Greg, Wilson, Bill, Bourgeat, Pierrick, Fripp, Jurgen, Gibson, Simon, Leroux, Hugo, McBride, Simon, Salvado, Olivier, Fenech, Michael, Francois, Maxime, Barnes, Mary, Baker, Jenalle, Barnham, Kevin, Bellingham, Shayne, Bomke, Julia, Pejoska, Sveltana Bozin, Buckley, Rachel ... AIBL Research Group (2017). A blood-based biomarker panel indicates IL-10 and IL-12/23p40 are jointly associated as predictors of β-amyloid load in an AD cohort. Scientific Reports, 7 (1) 14057. doi: 10.1038/s41598-017-14020-9
George, J M, Fiori, S, Fripp, J, Pannek, K, Bursle, J, Moldrich, R X, Guzzetta, A, Coulthard, A, Ware, R S, Rose, S E, Colditz, P B and Boyd, R N (2017). Reply. American Journal of Neuroradiology, 39 (3), E40-E40. doi: 10.3174/ajnr.A5478
Paproki, Anthony, Engstrom, Craig, Strudwick, Mark, Wilson, Katharine J., Surowiec, Rachel K., Ho, Charles, Crozier, Stuart and Fripp, Jurgen (2017). Automated T2-mapping of the Menisci From Magnetic Resonance Images in Patients with Acute Knee Injury. Academic Radiology, 24 (10), 1295-1304. doi: 10.1016/j.acra.2017.03.025
Neubert, Aleš, Wilson, Katharine J., Engstrom, Craig, Surowiec, Rachel K., Paproki, Anthony, Johnson, Nicholas, Crozier, Stuart, Fripp, Jurgen and Ho, Charles P. (2017). Comparison of 3D bone models of the knee joint derived from CT and 3T MR imaging. European Journal of Radiology, 93, 178-184. doi: 10.1016/j.ejrad.2017.05.042
George, J. M., Fiori, S., Fripp, J., Pannek, K., Bursle, J., Moldrich, R. X., Guzzetta, A., Coulthard, A., Ware, R. S., Rose, S. E., Colditz, P. B. and Boyd, R. N. (2017). Validation of an MRI brain injury and growth scoring system in very preterm infants scanned at 29-to 35-week postmenstrual age. American Journal of Neuroradiology, 38 (7), 1435-1442. doi: 10.3174/ajnr.A5191
Zheng, Guoyan, Chu, Chengwen, Belavy, Daniel L., Ibragimov, Bulat, Korez, Robert, Vrtovec, Tomaž, Hutt, Hugo, Everson, Richard, Meakin, Judith, Andrade, Isabel, Glocker, Ben, Chen, Hao, Dou, Qi, Heng, Pheng-Ann, Wang, Chunliang, Forsberg, Daniel, Neubert, Aleš, Fripp, Jurgen, Urschler, Martin, Stern, Darko, Wimmer, Maria, Novikov, Alexey A., Cheng, Hui, Armbrecht, Gabriele, Felsenberg, Dieter and Li, Shuo (2017). Evaluation and comparison of 3D intervertebral disc localization and segmentation methods for 3D T2 MR data: a grand challenge. Medical Image Analysis, 35, 327-344. doi: 10.1016/j.media.2016.08.005
Chandra, Shekhar S., Dowling, Jason A., Greer, Peter B., Martin, Jarad, Wratten, Chris, Pichler, Peter, Fripp, Jurgen and Crozier, Stuart (2016). Fast automated segmentation of multiple objects via spatially weighted shape learning. Physics in Medicine and Biology, 61 (22), 8070-8084. doi: 10.1088/0031-9155/61/22/8070
Neubert, A., Yang, Z., Engstrom, C., Xia, Y., Strudwick, M. W., Chandra, S. S., Fripp, J. and Crozier, S. (2016). Automatic segmentation of the glenohumeral cartilages from magnetic resonance images. Medical Physics, 43 (10), 5370-5379. doi: 10.1118/1.4961011
Lai, Melissa M., D'Acunto, Giulia, Guzzetta, Andrea, Boyd, Roslyn N., Rose, Stephen E., Fripp, Jurgen, Finnigan, Simon, Ngenda, Naoni, Love, Penny, Whittingham, Koa, Pannek, Kerstin, Ware, Robert S. and Colditz, Paul B. (2016). PREMM: preterm early massage by the mother: protocol of a randomised controlled trial of massage therapy in very preterm infants. BMC Pediatrics, 16 (146) 146, 1-12. doi: 10.1186/s12887-016-0678-7
Scheck, Simon M., Fripp, Jurgen, Reid, Lee, Pannek, Kerstin, Fiori, Simona, Boyd, Roslyn N. and Rose, Stephen E. (2016). Extent of altered white matter in unilateral and bilateral periventricular white matter lesions in children with unilateral cerebral palsy. Research in Developmental Disabilities, 55, 368-376. doi: 10.1016/j.ridd.2016.04.007
Shen, Kai-Kai, Dore, Vincent, Rose, Stephen, Fripp, Jurgen, McMahon, Katie L., de Zubicaray, Greig I., Martin, Nicholas G., Thompson, Paul M., Wright, Margaret J. and Salvado, Olivier (2016). Heritability and genetic correlation between the cerebral cortex and associated white matter connections. Human Brain Mapping, 37 (6), 2331-2347. doi: 10.1002/hbm.23177
Dowling, Jason A., Sun, Jidi, Pichler, Peter, Rivest-Hénault, David, Ghose, Soumya, Richardson, Haylea, Wratten, Chris, Martin, Jarad, Arm, Jameen, Best, Leah, Chandra, Shekhar S., Fripp, Jurgen, Menk, Frederick W. and Greer, Peter B. (2015). Automatic substitute computed tomography generation and contouring for magnetic resonance imaging (MRI)-alone external beam radiation therapy from standard MRI sequences. International Journal of Radiation Oncology Biology Physics, 93 (5), 1144-1153. doi: 10.1016/j.ijrobp.2015.08.045
Kerbler, Georg M., Nedelska, Zuzana, Fripp, Jurgen, Laczo, Jan, Vyhnalek, Martin, Lisy, Jiri, Hamlin, Adam S., Rose, Stephen, Hort, Jakub and Coulson, Elizabeth J. (2015). Basal forebrain atrophy contributes to allocentric navigation impairment in Alzheimer's disease patients. Frontiers in Aging Neuroscience, 7 (185) 185, 1-11. doi: 10.3389/fnagi.2015.00185
Xia, Ying, Fripp, Jurgen, Chandra, Shekhar S., Walker, Duncan, Crozier, Stuart and Engstrom, Craig M. (2015). Automated 3D quantitative assessment and measurement of alpha angles from the femoral head-neck junction using MR imaging. Physics in Medicine and Biology, 60 (19), 7601-7616. doi: 10.1088/0031-9155/60/19/7601
Pagnozzi, Alex M., Gal, Yaniv, Boydm, Roslyn N., Fiori, Simona, Fripp, Jurgen, Rose, Stephen and Dowson, Nicholas (2015). The need for improved brain lesion segmentation techniques for children with cerebral palsy: A review. International Journal of Developmental Neuroscience, 47 (Part B), 229-246. doi: 10.1016/j.ijdevneu.2015.08.004
George, Joanne M., Boyd, Roslyn N., Colditz, Paul B., Rose, Stephen E., Pannek, Kerstin, Fripp, Jurgen, Lingwood, Barbara E., Lai, Melissa M., Kong, Annice HT., Ware, Robert S., Coulthard, Alan, Finn, Christine M. and Bandaranayake, Sasaka E. (2015). PPREMO: A prospective cohort study of preterm infant brain structure and function to predict neurodevelopmental outcome. BMC Pediatrics, 15 (123) 123, 123. doi: 10.1186/s12887-015-0439-z
Chandra, Shekhar S., Surowiec, Rachel, Ho, Charles, Xia, Ying, Engstrom, Craig M., Crozier, Stuart and Fripp, Jurgen (2015). Automated analysis of hip joint cartilage combining MR T2 and three-dimensional fast-spin-echo images. Magnetic Resonance in Medicine, 75 (1), 403-413. doi: 10.1002/mrm.25598
Yang, Zhengyi, Fripp, Jurgen, Chandra, Shekhar S., Neubert, Ales, Xia, Ying, Strudwick, Mark, Paproki, Anthony, Engstrom, Craig and Crozier, Stuart (2015). Automatic bone segmentation and bone-cartilage interface extraction for the shoulder joint from magnetic resonance images. Physics in Medicine and Biology, 60 (4), 1441-1459. doi: 10.1088/0031-9155/60/4/1441
Neubert, Ales, Jurgen, Fripp, Engstrom, Craig M., Schwarz, Daniel, Weber, Marc-André and Crozier, Stuart (2015). Statistical shape model reconstruction with sparse anomalous deformations: application to intervertebral disc herniation. Computerized Medical Imaging and Graphics, 46, 11-19. doi: 10.1016/j.compmedimag.2015.05.002
Kerbler, Georg M., Fripp, Jürgen, Rowe, Christopher C., Villemagne, Victor L., Salvado, Olivier, Rose, Stephen, Coulson, Elizabeth J. and Alzheimer's Disease Neuroimaging Initiative (2015). Basal forebrain atrophy correlates with amyloid beta burden in Alzheimer's disease. NeuroImage: Clinical, 7, 105-113. doi: 10.1016/j.nicl.2014.11.015
Xia, Ying, Chandra, Shekhar S., Engstrom, Craig M., Strudwick, Mark W., Crozier, Stuart and Fripp, Jurgen (2014). Automatic hip cartilage segmentation from 3D MR images using arc-weighted graph searching. Physics In Medicine And Biology, 59 (23), 7245-7266. doi: 10.1088/0031-9155/59/23/7245
Shen, Kai-Kai, Rose, Stephen, Fripp, Jurgen, McMahon, Katie L., de Zubicaray, Greig I., Martin, Nicholas G., Thompson, Paul M., Wright, Margaret J. and Salvado, Olivier (2014). Investigating brain connectivity heritability in a twin study using diffusion imaging data. Neuroimage, 100, 628-641. doi: 10.1016/j.neuroimage.2014.06.041
Neubert, Ales, Fripp, Jurgen, Engstrom, Craig, Gal, Yaniv, Crozier, Stuart and Kingsley, Michael I. C. (2014). Validity and reliability of computerized measurement of lumbar intervertebral disc height and volume from magnetic resonance images. The Spine Journal, 14 (11), 2773-2781. doi: 10.1016/j.spinee.2014.05.023
Chandra, Shekhar S., Xia, Ying, Engstrom, Craig, Crozier, Stuart, Schwarz, Raphael and Fripp, Jurgen (2014). Focused shape models for hip joint segmentation in 3D magnetic resonance images. Medical Image Analysis, 18 (3), 567-578. doi: 10.1016/j.media.2014.02.002
Paproki, A., Engstrom, C., Chandra, S. S., Neubert, A., Fripp, J. and Crozier, S. (2014). Automated segmentation and analysis of normal and osteoarthritic knee menisci from magnetic resonance images: data from the Osteoarthritis Initiative. Osteoarthritis and Cartilage, 22 (9), 1259-1270. doi: 10.1016/j.joca.2014.06.029
Bourgeat, P., Dore, V., Villemagne, V. L., Rowe, C. C., Salvado, O. and Fripp, J. (2013). MilxXplore: a web-based system to explore large imaging datasets. Journal of the American Medical Informatics Association, 20 (6), 1046-1052. doi: 10.1136/amiajnl-2012-001545
Xia, Ying, Fripp, Jurgen, Chandra, Shekhar S., Schwarz, Raphael, Engstrom, Craig and Crozier, Stuart (2013). Automated bone segmentation from large field of view 3D MR images of the hip joint. Physics in Medicine and Biology, 58 (20), 7375-7390. doi: 10.1088/0031-9155/58/20/7375
Dore, Vincent, Villemagne, Victor L., Bourgeat, Pierrick, Fripp, Jurgen, Acosta, Oscar, Chetelat, Gael, Zhou, Luping, Martins, Ralph, Ellis, Kathryn A., Masters, Colin L., Ames, David, Salvado, Oliver and Rowe, Christopher C. (2013). Cross-sectional and Longitudinal Analysis of the Relationship Between A beta Deposition, Cortical Thickness, and Memory in Cognitively Unimpaired Individuals and in Alzheimer Disease. Jama Neurology, 70 (7), 903-911. doi: 10.1001/jamaneurol.2013.1062
Neubert, A., Fripp, J., Engstrom, C., Walker, D., Weber, M-A., Schwarz, R. and Crozier, S. (2013). Three-dimensional morphological and signal intensity features for detection of intervertebral disc degeneration from magnetic resonance images. Journal of the American Medical Informatics Association, 20 (6), 1082-1090. doi: 10.1136/amiajnl-2012-001547
Chandra, Shekhar S., Dowling, Jason A., Shen, Kai-Kai, Raniga, Parnesh, Pluim, Josien P. W., Greer, Peter B., Salvado, Olivier and Fripp, Jurgen (2012). Patient specific prostate segmentation in 3-D magnetic resonance images. IEEE Transactions On Medical Imaging, 31 (10) 6257497, 1955-1964. doi: 10.1109/TMI.2012.2211377
Raffelt, David, Tournier, J-Donald, Fripp, Jurgen, Crozier, Stuart, Connelly, Alan and Salvado, Olivier (2011). Symmetric diffeomorphic registration of fibre orientation distributions. Neuroimage, 56 (3), 1171-1180. doi: 10.1016/j.neuroimage.2011.02.014
Engstrom, Craig M., Fripp, Jurgen, Jurcak, Valer, Walker, Duncan G., Salvado, Olivier and Crozier, Stuart (2011). Segmentation of the quadratus lumborum muscle using statistical shape modeling. Journal of Magnetic Resonance Imaging, 33 (6), 1422-1429. doi: 10.1002/jmri.22188
Fripp, Jurgen, Crozier, Stuart, Warfield, Simon K. and Ourselin, Sébastien (2010). Automatic segmentation and quantitative analysis of the articular cartilages from magnetic resonance images of the knee. IEEE Transactions on Medical Imaging, 29 (1) 5071225, 55-64. doi: 10.1109/TMI.2009.2024743
Fripp, Jurgen, Bourgeat, Pierrick, Crozier, Stuart and Ourselin, Sebastien (2007). Segmentation of the bones in MRIs of the knee using phase, magnitude, and shape information. Academic Radiology, 14 (10), 1201-1208. doi: 10.1016/j.acra.2007.06.021
Fripp, Jurgen, Crozier, Stuart, Warfield, Simon K. and Ourselin, Sébastien (2007). Automatic segmentation of the bone and extraction of the bone-cartilage interface from magnetic resonance images of the knee. Physics In Medicine And Biology, 52 (6) 005, 1617-1631. doi: 10.1088/0031-9155/52/6/005
Bourgeat, P., Fripp, J., Stanwell, P., Ramadan, S. and Ourselin, S. (2007). MR image segmentation of the knee bone using phase information. Medical Image Analysis, 11 (4), 325-335. doi: 10.1016/j.media.2007.03.003
Conference Papers
Burgess, A., Reedman, S., Hines, A., Bleyenheuft, Y., Novak, I., Elliott, C., Morgan, C., Norfolk, E., Pannek, K., Fripp, J., Ware, R., Boyd, R. and Sakzewski, L. (2024). Predictors of upper limb performance response to hand-arm bimanual intensive therapy including lower extremity in children with bilateral CP. Australasian Academy of Cerebral Palsy and Developmental Medicine, Cairns, QLD Australia, 31 July-3 August 2024. Chichester, West Sussex, United Kingdom: Wiley-Blackwell Publishing.
Sakzewski, L., Bleyenheuft, Y., Novak, I., Elliott, C., Reedman, S., Morgan, C., Pannek, K., Fripp, J., Ware, R. and Boyd, R. (2024). HABIT-ILE Australia: Randomized trial of hand-arm bimanual intensive training including lower extremity for children with bilateral cerebral palsy. 12th AusACPDM Biennial Conference, Cairns, QLD Australia, 31 July - 3 August 2024. Chichester, West Sussex United Kingdom: Wiley-Blackwell.
Peters, Joshua, Lebrat, Leo, Cruz, Rodrigo Santa, Nicolson, Aaron, Belous, Gregg, Konate, Salamata, Raniga, Parnesh, Dore, Vincent, Bourgeat, Pierrick, Mejan-Fripp, Jurgen, Fookes, Clinton and Salvado, Olivier (2023). DBCE : A Saliency Method for Medical Deep Learning Through Anatomically-Consistent Free-Form Deformations. 2023 IEEE/CVF Winter Conference on Applications of Computer Vision (WACV), Waikoloa, HI United States, 2-7 January 2023. Piscataway, NJ United States: Institute of Electrical and Electronics Engineers. doi: 10.1109/WACV56688.2023.00200
Woo, Boyeong, Bran Lorenzana, Marlon, Engstrom, Craig, Baresic, William, Fripp, Jurgen, Crozier, Stuart and Chandra, Shekhar S. (2023). Semantic segmentation of 3D medical images through a kaleidoscope: data from the Osteoarthritis Initiative. Medical Imaging with Deep Learning, Nashville, TN, United States, 10-12 July 2023. Cambridge, MA, United States: ML Research Press.
Woo, Boyeong, Bran Lorenzanal, Marlon, Engstrom, Craig, Baresic, William, Fripp, Jurgen, Crozier, Stuart and Chandra, Shekhar S. (2023). Semantic segmentation of 3D medical images through a kaleidoscope: data from the Osteoarthritis Initiative. 6th International Conference on Medical Imaging with Deep Learning (MIDL), Nashville, TN, United States, 10-12 July 2023. San Diego, CA, United States: JMLR-Journal of Machine Learning Research.
Santa Cruz, Rodrigo, Lebrat, Léo, Fu, Darren, Bourgeat, Pierrick, Fripp, Jurgen, Fookes, Clinton and Salvado, Olivier (2022). CorticalFlow+ + : Boosting Cortical Surface Reconstruction Accuracy, Regularity, and Interoperability. 25th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Singapore, 18-22 September 2022. Cham, Switzerland: Springer. doi: 10.1007/978-3-031-16443-9_48
Woo, Boyeong, Engstrom, Craig, Fripp, Jurgen, Crozier, Stuart and Chandra, Shekhar S. (2022). Anomaly-aware 3D segmentation of knee magnetic resonance images. 5th International Conference on Medical Imaging with Deep Learning, Zurich, Switzerland, 6-8 July 2022. Cambridge, MA, United States: ML Research Press.
Cruz, Rodrigo Santa, Lebrat, Leo, Bourgeat, Pierrick, Dore, Vincent, Dowling, Jason, Fripp, Jurgen, Fookes, Clinton and Salvado, Olivier (2021). Going Deeper With Brain Morphometry Using Neural Networks. 2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI), Nice, France, 13-16 April 2021. Piscataway, NJ United States: IEEE. doi: 10.1109/isbi48211.2021.9434039
Konate, Salamata, Lebrat, Leo, Cruz, Rodrigo Santa, Bourgeat, Pierrick, Dore, Vincent, Fripp, Jurgen, Bradley, Andrew, Fookes, Clinton and Salvado, Olivier (2021). Smocam: Smooth conditional attention mask for 3D-regression models. 2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI), Nice, France, 13-16 April 2021. Piscataway, NJ United States: IEEE. doi: 10.1109/ISBI48211.2021.9433972
Rusak, Filip, Santa Cruz, Rodrigo, Bourgeat, Pierrick, Fookes, Clinton, Fripp, Jurgen, Bradley, Andrew and Salvado, Olivier (2020). 3D Brain MRI GAN-Based Synthesis Conditioned on Partial Volume Maps. 5th International Workshop of Simulation and Synthesis in Medical Imaging SASHIMI 2020, Lima, Peru, 4 October 2020. Heidelberg, Germany: Springer. doi: 10.1007/978-3-030-59520-3_2
Cummins, Tia L., Xia, Ying, Elias, Alby, Lamb, Fiona, Pannek, Kerstin, Dore, Vincent, Bourgeat, Pierrick, Williams, Robert, Salvado, Olivier, Fripp, Jurgen, Ponsford, Jennie, Villemagne, Victor L., Hopwood, Mal and Rowe, Christopher (2018). Tau, Aβ‐amyloid, Brain Structure And Cognitive Function Following Service‐related Traumatic Brain Injury In Australian Vietnam War Veterans. AAIC 2018, Chicago, IL United States, 22-26 July 2018. Wiley. doi: 10.1016/j.jalz.2018.06.2155
Reid, Lee B., Gillman, Ashley, Pagnozzi, Alex M., Manjón, José V. and Fripp, Jurgen (2018). MRI denoising and artefact removal using self-organizing maps for fast global block-matching. 4th International Workshop on Patch-Based Techniques in Medical Imaging, Patch-MI 2018 Held in Conjunction with 21st International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2018, Granada, Spain, 20 September 2018. Heidelberg, Germany: Springer. doi: 10.1007/978-3-030-00500-9_3
Saha, Susmita, Pagnozzi, Alex, George, Joanne, Colditz, Paul B., Boyd, Roslyn, Rose, Stephen, Fripp, Jurgen and Pannek, Kerstin (2018). Investigating brain age deviation in preterm infants: a deep learning approach. First International Workshop DATRA 2018 and Third International Workshop PIPPI 2018, Held in Conjunction with MICCAI 2018, Granada, Spain, 16 September 2018. Cham, Switzerland: Springer. doi: 10.1007/978-3-030-00807-9_9
Neubert, Ales, Naser, Ibrahim, Paproki, Anthony, Engstrom, Craig, Fripp, Jurgen, Crozier, Stuart and Chandra, Shekhar S. (2016). Incremental shape learning of 3D surfaces of the knee, data from the osteoarthritis initiative. 2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI), Prague, Czech Republic, 13-16 April, 2016. Piscataway, United States: IEEE Operations Center. doi: 10.1109/ISBI.2016.7493406
Paproki, Anthony, Wilson, Katharine J., Surowiec, Rachel K., Ho, Charles P., Pant, Abinash, Bourgeat, Pierrick, Engstrom, Craig, Crozier, Stuart and Fripp, Jurgen (2016). Automated segmentation and T2-mapping of the posterior cruciate ligament from MRI of the knee: data from the osteoarthritis initiative. IEEE International Symposium on Biomedical Imaging (ISBI), Prague, Czech Republic, 13-16 April 2016. Piscataway, NJ, United States: IEEE. doi: 10.1109/ISBI.2016.7493298
Neubert, Aleš, Fripp, Jurgen, Chandra, Shekhar S., Engstrom, Craig and Crozier, Stuart (2016). Automated intervertebral disc segmentation using probabilistic shape estimation and active shape models. Third International Workshop and Challenge, CSI 2015, Munich, Germany, 5 October 2015. Switzerland: Springer. doi: 10.1007/978-3-319-41827-8_15
Yang, Zhengyi, Fripp, Jurgen, Engstrom, Craig, Chandra, Shekhar, Xia, Ying, Paproki, Anthony, Strudwick, Mark, Neubert, Ales and Crozier, Stuart (2014). Automatic Bone Segmentation for Shoulder {MRI} using Statistical Shape Models. 2014 – Joint Annual Meeting ISMRM-ESMRMB, 22nd Scientific Meeting and Exhibition, Milan, Italy, 10-16 May 2014. Berkeley, CA United States: International Society for Magnetic Resonance in Medicine.
Dowling, J. A., Burdett, N., Greer, P. B., Sun, J., Parker, J., Pichler, P., Stanwell, P., Chandra, S., Rivest-Henault, D., Ghose, S., Salvado, O. and Fripp, J. (2014). Automatic atlas based electron density and structure contouring for MRI-based prostate radiation therapy on the cloud. XVII International Conference on the Use of Computers in Radiation Therapy, Melbourne, Australia, 6–9 May 2013. Bristol, United Kingdom: Institute of Physics Publishing. doi: 10.1088/1742-6596/489/1/012048
Neubert, Aleš, Fripp, Jurgen, Engstrom, Craig and Crozier, Stuart (2014). Segmentation of lumbar intervertebral discs from high-resolution 3D MR images using multi-level statistical shape models. 16th International Conference on Medical Image Computing and Computer Assisted Intervention, Nagoya, Japan, 22-26 September 2013. Heidelberg, Germany: Springer. doi: 10.1007/978-3-319-07269-2_15
Neubert, Ales, Fripp, Jurgen, Engstrom, Craig, Walker, Duncan, Schwarz, Raphael and Crozier, Stuart (2013). Automatic quantification of 3D morphology and appearance of intervertebral discs in high resolution MRI. International Society for Magnetic Resonance in Medicine, 21st Annual Meeting and Exhibition, Salt Lake City, UT, United States, 20-26 April 2013. New York, NY, United States: International Society of Magnetic Resonance in Medicine.
Brancato, T., Engstrom, C. and Fripp, J. (2012). Muscle morphometry of the individual hamstring muscles in semi-elite AFL players: Preliminary findings from a longitudinal study. Be Active 2012, Sydney, NSW Australia, 31 October - 3 November 2012. Chatswood, NSW Australia: Elsevier. doi: 10.1016/j.jsams.2012.11.237
Xia, Ying, Chandra, Shakes, Salvado, Oliver, Fripp, Jurgen, Schwartz, Raphael, Lauer, Lars, Engstrom, Craig M. and Crozier, Stuart (2012). Automated bone segmentation and bone-cartilage interface extraction from MR images of the hip. International Society for Magnetic Resonance in Medicine, Melbourme, VIC, Australia, 5-11 May 2012.
Yang, Zhengyi, Crozier, Stuart, Engstrom, Craig, Xia, Ying, Neubert, Ales, Brancato, Tania, Schwarz, Raphael, Lauer, Lars, Fripp, Jurgen, Chandra, Shekhar and Salvado, Olivier (2012). Morphology-based interslice interpolation on manual segmentations of joint bones and muscles in MRI. 2012 International Conference on Digital Image Computing Techniques and Applications (DICTA), Fremantle, WA, Australia, 3-5 December 2012. Piscataway, NJ, United States: IEEE. doi: 10.1109/DICTA.2012.6411678
Chandra, Shekhar, Dowling, Jason, Shen, Kaikai, Pluim, Josien, Greer, Peter, Salvado, Olivier and Fripp, Jurgen (2011). Automatic segmentation of the prostate in 3D magnetic resonance images using case specific deformable models. International Conference on Digital Image Computing: Techniques and Applications, DICTA 2011, Noosa Heads, Qld., Australia, 6-8 December 2011. Piscataway, NJ, United States: I E E E. doi: 10.1109/DICTA.2011.10
Raffelt, David A., Tournier, J.- Donald, Fripp, Jurgen, Connelly, Alan, Crozier, Stuart and Salvado, Oliver (2010). Symmetric diffeomorphic normalisation of fibre orientation distributions. ISMRM-ESMRMB Joint Annual Meeting 2010: Clinical Needs and Technological Solutions, Stockholm, Sweden, 1-7 May 2010. Berkeley, CA, U.S.A.: Curran Associates.
Fripp, J., Jurcak, V., Holt, R., Ourselin, S., Engstrom, C. and Crozier, S. (2008). Reproducibility of Automatic Quantitative Analysis of the Articular Cartilages from MEDIC and weDESS Magnetic Resonance Images of the Knee at 1.5T. The International Society for Magnetic Resonance in Medicine's 16th Scientific Meeting and Exhibition, Toronto, Ontario, Canada, 3-9 May 2008. USA: International Society for Magnetic Resonance in Medicine.
Fripp, J., Bourgeat, P., Acosta, O., Jones, G., Villemagne, V., Ourselin, S., Rowe, C. and Salvado, O. (2008). Generative atlases and atlas selection for C11-PIBPET-PET registration of elderly, mild cognitive impaired and Alzheimer disease patients. 5th IEEE International Symposium on Biomedical Imaging (ISBI’08), Paris, France, 14-17 May 2008. Piscataway, NJ, United States: IEEE. doi: 10.1109/ISBI.2008.4541206
Jurcak,V., Fripp, J., Engstrom, C., Walker, D., Salvado, O., Ourselin, S. and Crozier, S. (2008). Automated segmentation of the quadratus lumborum muscle from magnetic resonance images using a hybrid atlas based - geodesic active contour scheme. 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2008, Vancouver, Canada, 20-25 Aug 2008. New York, USA: IEEE. doi: 10.1109/IEMBS.2008.4649291
Jurcak,V., Fripp, J., Engstrom, C., Walker, D., Salvado, O., Ourselin, S. and Crozier, S. (2008). Atlas based automated segmentation of the quadratus lumborum muscle using non-rigid registration on magnetic resonance images of the thoracolumbar region. 5th IEEE International Symposium on Biomedical Imaging - From Nano to Macro, Paris, France, 14-17 May 2008. New York, USA: IEEE. doi: 10.1109/ISBI.2008.4540945
Fripp, J., Brougeat, P., Crozier, S. and Ourselin, S. (2007). Shape based segmentation of MRI's of the bones in the knee using phase and intensity information. Medical Imaging 2007: Image Processing, San Diego, USA, 18 - 20 February, 2007. USA: SPIE.
Fripp J., Bourgeat P., Crozier S. and Ourselin S. (2007). Shape based segmentation of MRIs of the bones in the knee using phase and intensity information. Medical Imaging 2007: Image Processing, San Diego, CA, February 18, 2007-February 20, 2007. doi: 10.1117/12.711234
Fripp, J., Ourselin, S., Warfield, S.K. and Crozier, S. (2007). Automatic segmentation of the bones from MR images of the knee. 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Arlington, Virginia, USA, 12-15 April, 2007. USA: IEEE. doi: 10.1109/ISBI.2007.356857
Fripp, Jurgen, Warfield, Stuart, Crozier, Simon K. and Ourselin, Sebastien (2007). Automatic segmentation of articular cartilage in magnetic resonance images of the knee. 10th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2007), Brisbane, Australia, 29 October - 2 November 2007. Berlin, Germany: Springer-Verlag. doi: 10.1007/978-3-540-75759-7_23
Fripp, Jurgen, Crozier, Stuart, Warfield, Simon K. and Ourselin, Sébastien (2006). A subdivision-based parametric deformable model for surface extraction and statistical shape modeling of the knee cartilages. Medical Imaging 2006: Visualization, Image-Guided Procedures, and Display, , , February 12, 2006-February 14, 2006. doi: 10.1117/12.652919
Bourgeat, Pierrick, Fripp, Jurgen, Stanwell, Peter, Ramadan, Saadallah and Ourselin, Sebastien (2006). MR image segmentation using phase information and a novel multiscale scheme. Medical Image Computing and Computer-Assisted Intervention: MICCAI 2006, Copenhagen, Denmark, 1-6 October, 2006. Berlin, Germany: Springer Verlag. doi: 10.1007/11866763_113
Bourgeat, Pierrick, Fripp, Jurgen, Janke, Andrew L., Galloway, Graham J., Crozier, Stuart and Ourselin, Sébastien (2005). The use of unwrapped phase in MR image segmentation: A preliminary study. 8th International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2005, , , October 26, 2005-October 29, 2005. Heidelberg: Springer-Verlag. doi: 10.1007/11566489_100